rs216665672 SNP Detail

Summary

• ID
  rs216665672
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132616756 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTGTATTT TGTTCTCTTA
  AGGGTAGGCT CCACAAATAG GCTGATTATA CAGTAGGATA GCACTTTTAA GACTTTTAAG
  TCTTTTTTAA TTTTTTTTTT TTTTGTAGTT GTTATGGTTT TTCAATACAG AGTCTCACTA
  TATAGCCCTG GCTGGCCTGG AACTCACAGA GCTCAAGCTG CCTTTGCCTC CCAAGTGCTG
  R
  TGTGATGATA AATAAATAAA TATAAATAAA TCAATCCCTC CATTTTATGC TAGGCATCCA
  TCTTGGTACT CACTAGCCAT TTATGGATGA CTCCAAGTTC TGGAAGACAA GTTCCCAATG
  ACCCTGACTC AATAAGCCAC TGTGCTGGCT GGTTTTGTGA GTTAACTTGA CACAGGCTAG
  AGTCATCAGA GAGGAAGGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321337164	CHEV_4_132445360	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216665672					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132616756 () rs orientation: forward

Symbol	Name	Function Class
Rr601104	regulatory region 601104	1764 bp distal
Rr601105	regulatory region 601105	1580 bp distal
Rr601106	regulatory region 601106	1470 bp distal