rs216610622 SNP Detail

Summary

• ID
  rs216610622
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119460569 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCGAGGGA CAGAGGCGGG
  AGTGAGCGAG TCGCAGCCCT GGGTTCACGT TGGTGGGCTT TGTTTCTGAG GTCACTTTCT
  CCACTAGAAA CCCAGGTTTC CTAGGTCAAC CCATCTTTCC TAGGTCAACC CATCTTTCCC
  GGCAGACAGC TGGAACCCAG GTTGTTGCAG GGTGTGACGG TCCTGTACAC TTTCTAAGCT
  Y
  TAAGCCTGAA CAACAGAAAA GCTGTGCCGT TCCTTTCTCA AGTCACCAAA ACCTGCTCTG
  AGTCCCACAC TAGATCTATC TTCCCTTTCT TTAGGGACAA TACAGATTTC TATTCCCTAA
  AGACAAAGCA TGCAACAACA AAAAGTAGGA ATCCTGGAGA GCAGTCTGAA TCAGGCCTGC
  TTCCTAGGAA TCTCACCCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321928140	CHEV_6_119433626	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216610622					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119460569 () rs orientation: forward

Symbol	Name	Function Class
Fbxl14	F-box and leucine-rich repeat protein 14	mRNA-UTR
Rr637693	regulatory region 637693	1293 bp distal
Rr637694	regulatory region 637694	124 bp distal
Rr637695	regulatory region 637695	421 bp distal
Rr637696	regulatory region 637696	1950 bp proximal
Tssr58510	transcription start site region 58510	1657 bp downstream
Wnt5b	wingless-type MMTV integration site family, member 5B	Intron