rs216595489 SNP Detail

Summary

• ID
  rs216595489
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141947087 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCGGGACCAG GACCAAGAGG
  AGCGGGCCTG GGGCAAGAGT GGGGGTGAAG GCGTGCCCCA AACCCTGGGT ATCTTCTCCT
  GAGATAAAGA AGAGTGAGAT CATTGTCCCA CTGCCCTGGG CCTGCATGTC CCTGCATACA
  GAGCCCTGTG CCCCCCCCCC CCACCTTTGC CGTATCAGAG GAGGTTATGT AGCTGGTATC
  A
  AGGTTTAACA TCTTTTCCCA TTATAAGGTC ATTTCAGGGG CATCTGGGAT TCCTCCTCAT
  GCAAATGAGG CATCCCCAGC CAATGGTGTA CACTCGTCCC AGTAGCACCT ACTGACCCCC
  CCCACAAAGA TTTAAATAGC TTTTGTTTCC CCCCAATAAA TAGAGCCAGT TCTCTGAAGT
  TGTTCCCAGG TGTGTGTTCT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321393875	CHEV_4_141775691	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216595489					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141947087 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Kazn	kazrin, periplakin interacting protein			Intron
				Noncoding-Transcript-Variant
Rr604032	regulatory region 604032			1133 bp proximal