rs216546532 SNP Detail

Summary

• ID
  rs216546532
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37842286 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATGTTCGC AGTGAGCACA
  GAGAAGCACA CGTACCTTTA GTCCTCACAT TAGACAAAGA AAAGATGCTG TTGTAAAGTT
  CTTTTATATT CGGTGTGACC TGTTATTAAG GAATATGTGG CTTTGCCTTT ATGAGCACAT
  GTAGGAATAG AGAAGAGGGA AGGAGCAAAG ATGAGGGAAG GAAGTTAGAA AGGGGAGGAG
  R
  AAGGGACAGA CAGAAGGAGG GAAGGAAGAA GCACAGGAGG AAAGAGGAAG GCGAAAAGAA
  GAAAAAACAG GGATGAAAGG AAGAGGGAGA GATGAAGTGG GGAAGGAGGA AGGAAGAGGG
  AGAGGAGGAG GGAAAGAAAT AGAACGAAGT TGGGAAGTTT GGAAGGAAGG AAGAAAGGAG
  GAAAGAGGAA GACAGGGAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320712806	CHEV_3_37687059	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216546532					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37842286 () rs orientation: forward

Symbol	Name	Function Class
Rr575564	regulatory region 575564	1016 bp distal
Rr575565	regulatory region 575565	214 bp proximal
Rr575566	regulatory region 575566	1185 bp proximal