rs216406333 SNP Detail

Summary

• ID
  rs216406333
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150544383 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAGT TTTCTGTGCA TGTTGCTGCC
  K
  CCTCCTCCTC CTCTTCCTCC TCTTC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321429229	CHEV_4_149834035	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216406333					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150544383 () rs orientation: forward

Symbol	Name	Function Class
Gm52709	predicted gene, 52709	within coordinates
Gm68777	predicted gene, 68777	within coordinates
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr605305	regulatory region 605305	127 bp distal
Rr605306	regulatory region 605306	1184 bp proximal
Rr605307	regulatory region 605307	1534 bp proximal
Rr605308	regulatory region 605308	1997 bp proximal