rs216230184 SNP Detail

Summary

• ID
  rs216230184
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:102277716 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAGAAGTG GTGATGGATT
  TGCAATGAGC CGTCTCTCTT AGTTTTTTTC TTTTTTAATC TCTCATGTAT TTGGGTCCAG
  CTGCCTTGGT ACAGGGATGT GCTGATTTCT GAAAACACCC CCTTAAAACC ATGTGGAGAT
  CAAACCTGTG CCCTTGGCTG ACTGAATCAA TGTTTCCCAC AGTGCTACTA GAGGGTCCTC
  R
  ACAAACACTT TGCTGAGTTA ATTTATCACC GCGTATCAAG ACCGATCTTG ACCTTATAAA
  CAGCTAGATT TGGCTTTGTT AAAGAGCCTA AGTAGAAGTT TCCTGGAGCA TAAGGGGAAA
  AGATTTTTTT TCCCTTAAAG AGAAATGTGA ATTAAGGAAC TTTTTTTTGC ATGCTTCGTA
  TGTGTATGTT TTATATGTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320437727	CHEV_2_102287528	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216230184					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102277716 () rs orientation: forward

Symbol	Name	Function Class
Fjx1	four jointed box 1	1995 bp downstream
Rr561693	regulatory region 561693	453 bp proximal