rs216218616 SNP Detail

Summary

• ID
  rs216218616
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:72358093 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGTTG TGGAAAGAAC CAACTCCTGC
  C
  AGTTGGCCTC TGATCTCCAT ACATT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321821594	CHEV_6_72331104	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216218616					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:72358093 () rs orientation: forward

Symbol	Name	Function Class
Gm52494	predicted gene, 52494	within coordinates
Rr632156	regulatory region 632156	1504 bp distal
Rr632157	regulatory region 632157	699 bp distal
Rr632158	regulatory region 632158	152 bp distal
Rr632159	regulatory region 632159	522 bp distal
Tssr61448	transcription start site region 61448	627 bp upstream
Tssr61449	transcription start site region 61449	570 bp downstream
Tssr61450	transcription start site region 61450	644 bp downstream
Vamp5	vesicle-associated membrane protein 5	642 bp upstream