rs216211071 SNP Detail

Summary

• ID
  rs216211071
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:118454767 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAACAGATT CATTTCAAAG GAACTGTAAC
  ATATGCAAAC AGGGGACCTT GGCTGTTTAT ATTGGAAGTA ACATTTTTTT TCTGTTAATA
  TTACATTCCT CCAAAGCTAG AAAGTCATCT TAAAGCTTTC AAATACCAGG CATTTCTTCT
  S
  CCTAAATTAC AGTTTCTCAA AGCAAAAAGA AAACGGAGCA CTTCTTCAAG AACCTTACAT
  GTGATCCATT TTCTCTTATA TATGATTCCT TTTGGTTCTG TTGCTATGTC TGCTACCGGC
  ATTGGGACTT AGTTTCAATG CTATTATTCT                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321924605	CHEV_6_118427824	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216211071					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:118454767 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17903	CpG island 17903	1158 bp proximal
Rr637483	regulatory region 637483	83 bp proximal
Rr637484	regulatory region 637484	634 bp proximal
Rr637485	regulatory region 637485	1504 bp proximal
Tssr62662	transcription start site region 62662	1431 bp downstream
Zfp9	zinc finger protein 9	Intron