rs216071802 SNP Detail

Summary

• ID
  rs216071802
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:131823143 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    caccaccag gtactccagg tatgggctgt
  gtataaaagg tctgcccgcc attacagcat tcgttcattc tctctctctc tctctctctc
  tctctctctc tctctctctc tctctctctt catctatgtt cttggctggt ctctttctct
  Y
  ccttttgtcc ttctctgttc cctgtcccac ccttctctgc tctcctggct atgctcctat
  ctgtctgtcc atctacacat ctacttgtct gcctctacct cttctctaag ctcccactcc
  tctccttccc cccagtaaac tccctttgta                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321330506	CHEV_4_131651747	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216071802					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131823143 () rs orientation: forward

Symbol	Name	Function Class
Gm13214	predicted gene 13214	1534 bp downstream
Rr600874	regulatory region 600874	1194 bp distal
Rr600875	regulatory region 600875	330 bp distal