rs216044329 SNP Detail

Summary

• ID
  rs216044329
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141303351 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTACCCATA TATTTAAAAC
  GAAGCCTCAT GAGGCTCTGG GTTCGATTCC TAGAATTCCA GAATATAGGA GTTGGAGACA
  AGGGATATGA AGTCAAGGCA ATCCAGGACG ATATAGTTAG TTCAAGGTCA GCCTGGGATA
  CTCAGGACAC TATCTCACTG AAACAAAACC CCCAAATAAA AACAACCAAC TCCCCCCACC
  G
  CAGACAAAAA CAAGACACAA GGAAAGAACA TATGTTTATT TTTTTCTGTG TGCAACTTAG
  AAGTTACAAA GCACAAAAAT GATTTTTTTT CTACTTTACA TTTTATCTCT ATTAGATGTG
  TGTGCACAAA CGTGTATCTT GGTATGCAGG TGTAAACCAG AGGACAACTT ATAGAATTGG
  CTCTCTCCTT CACTGTGGGT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321388167	CHEV_4_141131955	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216044329					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141303351 () rs orientation: forward

Symbol	Name	Function Class
Fblim1	filamin binding LIM protein 1	22 bp downstream
Gm68503	predicted gene, 68503	866 bp upstream
Rr603811	regulatory region 603811	1859 bp distal
Rr603812	regulatory region 603812	877 bp distal
Rr603813	regulatory region 603813	376 bp distal
Rr603814	regulatory region 603814	447 bp distal
Rr603815	regulatory region 603815	1019 bp proximal
Tssr44332	transcription start site region 44332	765 bp downstream