rs215977507 SNP Detail

Summary

• ID
  rs215977507
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:62398828 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCGGGCGTG GGGCCGGGAA CTTTCTTGGG
  GCGGGGGAAC TGGCAGGGAC CAGGGACCGG GGTGGGTGGG TGGGGGATAG TGGCTTTTCT
  GTGGCTTCCC TTGCAGAAGG AGgtggttaa aggtgtgacc tctggagtaa actggatcgg
  W
  gtttgaatcc tgCCCCCTCC CTGTGAGTCA CTGATCCAAG CTTGGTGTCT CTCACCAGTA
  GTTTCTAGGC ATTCATAACA CCACGTGATT GTTATAGCTG ACCTCGTAAA AACTTAGTCC
  CCCCCTAACC TCTTGACTTA GAGTCACCCT                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321142463	CHEV_4_62141625	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215977507					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:62398828 () rs orientation: forward

Symbol	Name	Function Class
Bspry	B-box and SPRY domain containing	Intron
Rr593317	regulatory region 593317	528 bp distal
Rr593318	regulatory region 593318	809 bp distal
Rr593319	regulatory region 593319	771 bp distal
Tssr37492	transcription start site region 37492	493 bp downstream