rs215946662 SNP Detail

Summary

• ID
  rs215946662
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:116646273 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAA GGAAAAGGGG AAGCAGGGGG
  R
  AATGCATCTC TCAGAGATTT CACAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321918465	CHEV_6_116619330	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215946662					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:116646273 () rs orientation: forward

Symbol	Name	Function Class
Rassf4	Ras association (RalGDS/AF-6) domain family member 4	Intron
Rr637228	regulatory region 637228	206 bp distal
Rr637229	regulatory region 637229	129 bp distal
Rr637230	regulatory region 637230	672 bp proximal
Rr637231	regulatory region 637231	948 bp proximal
Rr637232	regulatory region 637232	1927 bp proximal
Tssr58383	transcription start site region 58383	73 bp upstream
Tssr58384	transcription start site region 58384	111 bp upstream
Tssr62604	transcription start site region 62604	921 bp upstream
Tssr62605	transcription start site region 62605	897 bp upstream