rs215940250 SNP Detail

Summary

• ID
  rs215940250
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:54504977 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTTGTTGC ACCAGCATCA
  AGTTAAGGGT GGCCTTGGTG TGGGCTGTAG AATGGCTTGT CTTCCAGGAA TTTGTTTGTT
  TGCAGTCAAG GTCTGACTCA TGTGGCCCAG ATGGCCTCAA GATCTTTCTG TGGCCAAGGA
  TGACAGTGAA CCCCTGATGC TGGTCTCAGA CGGCCACAGC ACCCTGTGCA CCCTATTTCC
  S
  TTTGGTGCTG GAGATTGAGT CTGGGGCCTT GTGCTTGCTA AGCAGGCACA CCCCCTAACC
  GACCTACATC TCCAGCCCCT CTCTAGGAAT TCTGGAATGT GTTCAAATGT CAAAGGCTAG
  GAGTTGATCT TCCATGGTTA CTTCAACCTT AATCCGTACC GTTTTTAAAC AGTGATTTCA
  GATAAAGATG GAGATCTTAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320772136	CHEV_3_54401478	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215940250					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54504977 () rs orientation: forward

Symbol	Name	Function Class
Gm40050	predicted gene, 40050	within coordinates
Rr576818	regulatory region 576818	336 bp proximal