rs215917232 SNP Detail

Summary

• ID
  rs215917232
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:172197174 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGCCAGGA GACAAAGGAG
  AGAACTGTTA ACTAGCAGAA TGCATTTTAT AGAGCTCTGG CTAACCGCCT CTTAGCCCAC
  GGTTACCCAG TCATTTGTCT CAGTTAACAT TTAAAGGAGT TTTTGTGAGA CAAATTCTCC
  ATTGTGAGAT CTCTGAAGTG GGATTGTCTT ATTTTCCTTA GTACAGCCCA CTGCCAAAAA
  A
  CTTCCTCTGA TGTCAAATCA GGATGTATTA CCGAAACTGA TTCCAAGGAC ATCCACATAG
  CTGAGCCAAG ATGCTCCAGG CCAGTGGCAG GTGGACTGGA AGAGGCCTCT CCACTGAGCC
  TGTGTTCTGT GCTTCAGGCT CTGGATCATC ACCCCCGCTG CTCTCCCATT CCGGTACCTA
  AGTAACATCT ATGCAAAGAA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320618305	CHEV_2_172180754	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215917232					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172197174 () rs orientation: forward

Symbol	Name	Function Class
Aurka	aurora kinase A	936 bp downstream
Fam210b	family with sequence similarity 210, member B	mRNA-UTR
Rr571655	regulatory region 571655	1472 bp distal
Rr571656	regulatory region 571656	63 bp proximal
Rr571657	regulatory region 571657	354 bp proximal
Tssr21947	transcription start site region 21947	1958 bp downstream