rs215827513 SNP Detail

Summary

• ID
  rs215827513
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135836635 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCTTGCCAA GAGCGACTAA GAAGGAATGA
  GCTCAGCTAC AGGCTACATG GGAAGATGCC TTCAGGATCC TGGCTTTTTT CTTGTGGAAG
  ACCAGGAGTG GGGGGTAGGG TGGTGGGGGA TGTACTTCAC AGTGCCCTGA AGGCACACCA
  K
  GATGACAGGT GCATACTGTG GCCAGGTGAG ACAGCCTAAG GGGAAGCAGG GGCCTGAAAC
  CGCCTGCTGG CTTTTCAGAT GGCTGCCTCC AGCATTTCCT CTTTGCCTAC CTGGAGCTTG
  GCTTACTGGG GTGAGGGCAA GCTCCCAGTT                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321354038	CHEV_4_135665239	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215827513					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135836635 () rs orientation: forward

Symbol	Name	Function Class
Rr602271	regulatory region 602271	1790 bp distal
Rr602272	regulatory region 602272	1990 bp distal
Rr602273	regulatory region 602273	595 bp proximal