rs215743777 SNP Detail

Summary

• ID
  rs215743777
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:22537626 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCGGGCCGA CACGTATCTC
  CCGCAGGAGA CAGAGGTGTT GACCACATGG TGGAGCCAAA ATGGAACGTA TCTCACACAG
  GACACAGAGG TTTCGACCGC CTGTTCTTTT CTAATGAAAG ACAGAAAAAA AGTGGATCTG
  GAGGAGAGGG GAGGTGGGGA GAAGCTGGGA GTGGAGAGAG GGGAAACTAT AATCAGGATA
  K
  ACTGTTTGAG AAAAGAAACC ATGTTTGACA AACAAACAAA TTGGTGTGTT AAGGTAAAAA
  AAAATCTGGT CAATTTTTTT GTGTTTATTC ATAGTTTTGC CCAGTTATAT TTTTGTTAGA
  TATCTGGGTT GTTTTTTTTT TTAAAATACA CCAAGGGCCT TTTTCCTGTT GAGGTACTAC
  AGGTCCAATA GAGAGTCACA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321765819	CHEV_6_22487627	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215743777					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:22537626 () rs orientation: forward

Symbol	Name	Function Class
Rr627119	regulatory region 627119	197 bp distal
Rr627120	regulatory region 627120	141 bp distal