rs215666900 SNP Detail

Summary

• ID
  rs215666900
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101531013 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCCCACCT CAGCTCGGAT
  TCTAAATAGC TGGGATTACA AGAATGTATT ACAGCAGCAC TTTATACATA TTGCTAGACA
  TGATGTGCCG AGTAAACTGT TGTAAAGGGG CCTCTAGTGA TGTGGGTGTT AGGGAGGGGG
  GGGGTGAAGC ATTCTCAAGT CTTTCACCTA GGGAGGGAGT CTTGAAAGTT TTCTTCTTTA
  R
  ATGCATAAGG AAGACTAGAA GGCATTAGAG TTAGATTTTC CCTTAGACCA GTTAGGTTCT
  GATAAGGCAC CTACCTGCTG GTTATGTGGT TAGGTGGCCT CTCCTTGAAG ACACACCTTG
  TTAAGAAGAG ATCACTGTCC TCACTCTACA AAATCTTTCC TTTCCTTCCC TGTGCTCCTT
  GAAAGAAACA TGAGAGGTGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321230901	CHEV_4_101346421	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215666900					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101531013 () rs orientation: forward

Symbol	Name	Function Class
Rr596196	regulatory region 596196	948 bp proximal
Rr596197	regulatory region 596197	1851 bp proximal