rs215437021 SNP Detail

Summary

• ID
  rs215437021
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:9664614 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCATTGTT TTAAGGTATA
  TATCAAAATT ACATGCCAAG TTGTGACTCA GTAAGTTGGC TTGGAAGAAC TAGTCATGAT
  CTTATTAGAA AGAAAAAGAA GAAAAAAAAA AAGAAAGAAA AGAAAAGAAA AAGAGCAGAG
  GGCTTCACGC CTCCCTGCAC GTCATCTGGT CGGTGTGTTG CACTGCAGGC GCCCTGGGAG
  Y
  AAAGGTGGCC GATGCCCTGT TCTTTCCATG TGTACACCAA GCATCTCCTA ACTAGAGAAC
  GAGCACAACC ATCAACAGCA GAGGCACAGC AATCATCCTG ATTGACAACC AGATTTGGCT
  AAGCCATAAT AAGGCTGGTT GTGAGAGGTT TCAAGTACTG TGAAATTCTT CAGAAAGCCA
  GACAGAAACC ATGTCTCAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320651638	CHEV_3_9599554	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215437021					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9664614 () rs orientation: forward

Symbol	Name	Function Class
Rr374491	regulatory region 374491	within coordinates
Rr573453	regulatory region 573453	1219 bp distal
Rr573454	regulatory region 573454	1273 bp distal
Rr573455	regulatory region 573455	149 bp proximal
Rr573456	regulatory region 573456	1106 bp proximal
Zfp704	zinc finger protein 704	Intron