rs215378612 SNP Detail

Summary

• ID
  rs215378612
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:100252235 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGGGACT GAGTTAGGGC
  TACACAGGAA GGTAAGAATA TCTGTCGCTT TTCAGGAGTG TTCTGCCCAG TTTGGGAACA
  GGCCTCTCAA CGGGTCACTG TAGTAGAACA GAGTTTGTGC CGGATGCTGG AGAGTGTATC
  CCTTCTTGTG GATCACTGGT GACTTTGGGA GAGCATCTTC CAGGAGGAAA GGCCACACAG
  R
  AATGAAAGGA TGAAGACATT AAACCATGTG AAGGAAAGCG AGGGTGGACA TCCTGGCAAG
  AAGCAGCCAA TACAAAAGGC TAGATGGTGT ATTGAGCAAC TACAAGCTGC TCTTACGTTC
  TAGGGATTAA AGAGTGCTGA AGATGTGGCT TGGGCCCTGT GATTACTATG TGGTGGGACT
  GTCACCAAGG GACTTTGCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321227037	CHEV_4_100067643	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215378612					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:100252235 () rs orientation: forward

Symbol	Name	Function Class
Gm35760	predicted gene, 35760	within coordinates
Ror1	receptor tyrosine kinase-like orphan receptor 1	Intron
Rr595987	regulatory region 595987	594 bp distal
Rr595988	regulatory region 595988	199 bp proximal