rs215257837 SNP Detail

Summary

• ID
  rs215257837
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:85110177 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTGGGTA TGTGATTTGA
  ATCCATTGAT CAACCTGTCT GTTTCTGTAC CAATATCATA GAGTTTTTAT TACTACTGCT
  CTGTAGTACA GTTTGAGATC AGGGATGTGA TTCCCCATGA AGTTCTTTTA TTGTTTAGGA
  TTGCACTAGC TATCCAAGGT TTTCTGTTTC TCCTTATAAA GTTGAGAATT GCTCTTTCAA
  Y
  GGCTGTAAAG TATTGGAATT TCAACGGGGC TTGCATTGAA TCTGTAGATT GCTTTTGTTA
  AGATGGCCAT TTTCACTACG TTAATCTTAC TGATTCAAGA GCATGGGAGA ACTTCCCATC
  TTCTGATATC ATCCTCAATT TCTTTCTTCA GAGACTTGAA GTTCTTGTCA TACAGGTCTT
  TTAATTTCTT GGTTAGAGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320372990	CHEV_2_85119990	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215257837					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:85110177 () rs orientation: forward

Symbol	Name	Function Class
Rr560461	regulatory region 560461	785 bp proximal