rs215221033 SNP Detail

Summary

• ID
  rs215221033
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:12751363 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATCAGATGT CACACTCCAT ATCTTAGTGT
  AAGtaataat aataataata ataataataa taataataat aataataata atTGATTTTT
  CTTATGTATC CAGGATTGTA TAATAATTAC TTATCCATTC CAGAGACTAA ACATGACAAC
  C
  CTAATATCAA GGCTAACTTC TAAATCTACA CCTGTTGTCA TTTAAAACAC ACAAGAAGGA
  TAACATGTTG TGCATGTTGT GGGTTTGAAA TTTGTCCTGG GTTGGCTCTT ATATTTAATG
  GAAACGTAAA CCAAGCTTAG GAGACCCGCA                                 
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321745450	CHEV_6_12701364	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215221033					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:12751363 () rs orientation: forward

Symbol	Name	Function Class
Rr626540	regulatory region 626540	1464 bp distal
Rr626541	regulatory region 626541	201 bp distal
Rr626542	regulatory region 626542	1115 bp proximal
Tssr59832	transcription start site region 59832	1924 bp upstream