rs215216838 SNP Detail

Summary

• ID
  rs215216838
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:121570633 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAGTTTAAA ACACAGTATA AAGATTTGCT ATTTAAAATA
  TATCTTTAGC ATTATTCATC CACATGTAAA GGCAGAGAAA CCCGCGTGGC CGCCCGTCCA
  R
  TGTTTATCTT ACCAGTTTTC GGAAGACTGA GTGGATTGTC TGCTTCTCCC GTTTATTCCC
  ATTGTAAAAG GCAATTTCTT CACTATTAGA GAAAATAAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320905784	CHEV_3_121479902	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215216838					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121570633 () rs orientation: forward

Symbol	Name	Function Class
Abcd3	ATP-binding cassette, sub-family D member 3	Intron
Rr584166	regulatory region 584166	924 bp proximal
Rr584167	regulatory region 584167	1222 bp proximal
Rr584168	regulatory region 584168	1568 bp proximal