rs215207953 SNP Detail

Summary

• ID
  rs215207953
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:109285184 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAGTAGGA AGGTGAGGCC
  ATGGGAGAAG CTACACTGAG GGAGATCTGC AAGCCAGGAT TGTATCAGAG GTAGAATCTA
  ATTAAAATCT TTTATGATGG TGTCTCTATA AAATCCAATA TTAAATAAAA AGTTAATAAG
  GATTTCATGC TGCTCACATA TCTGCCTATT TTATAAACCA TGCACTTCAG ATGTTGCATA
  G
  TTAAGTATAA ATAAGGATTT GGCTCTTCTC CCCAAACTTA CAAGCTACAG GGGAGGTAAG
  AACACATATA CTCTCTGTGT ATATGTATAC ATATATGTGA ATATATGTAC AGATAAATAT
  ATTGGACTAT GTGTCCATGT CAATATAGAT ACATACACAC ACATATATAC AAATAATAAG
  GGAAATAATG CTGATCACTA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320868592	CHEV_3_109180786	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215207953					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:109285184 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr583413	regulatory region 583413			325 bp proximal
Vav3	vav 3 oncogene			Intron
				Noncoding-Transcript-Variant