rs215067885 SNP Detail

Summary

• ID
  rs215067885
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:106087794 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATCTGATG CCCTCTTGTG
  GCCTTCCACA GCACTGTACA CACATGGCAC ATAGACATGC AAACAAAACA CCCATACACA
  CAAAATAATA AAAATTATTC TTTAATGCTT TTAAAACCTA TGGGTAGAGG TGATGTCAGC
  ATATAATCCC AACACTTGAA AGACTAAGGC AAAAGGTCAT GAGCTTACAG AAAGCCTCTG
  Y
  GCATAATGAG TTAAGAACAG CCTAAGCTAT CTGACTACAG TTTAAGAAAT AATTCAGGGT
  AATATAGTAC GTTCTTTGCA TGTCCAACAC ATGGTTGATG CCTACCACTG CAAAATAATT
  ATAGATAAAC AAATAATCAT CTTTATGCAT GAGACGTAGA CTTTTTGCTG ATTTGGACTT
  CAAGGGAAAC AATATTCAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321245680	CHEV_4_105903202	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215067885					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106087794 () rs orientation: forward

Symbol	Name	Function Class
Gm12729	predicted gene 12729	within coordinates
Rr596708	regulatory region 596708	1592 bp distal
Rr596709	regulatory region 596709	1875 bp distal
Rr596710	regulatory region 596710	175 bp distal
Rr596711	regulatory region 596711	1589 bp proximal