rs215036876 SNP Detail

Summary

• ID
  rs215036876
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:54478758 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAACCAGGG TTTACCTTCC
  CCAACCATAT CTATTCTACC AACGAATAGG GGTAAGGTTG TTTTAATGAG ATGTTCCCCA
  TAATCTCGGG AGTTTGGATG TGTCCCCAAG TGATGGAGCT GTTTGGGAGG TTTAGGGGGT
  TGTTTCTCCC TCCTCTTCCT CTCCCTCCCC TCCCCCTCTT CCCTCCTAGC AGTTCCGGAT
  R
  TGAGCCCTCA GCTTCCTGCT CTTACCACCA GGCCTCACTC TGCCATCACA GGCCACACCC
  CTCAGGGATG AGAAGCCCAA ATAATTTTTT TTTTCTTCTA AAAGTCATCT TGCTCATGTT
  GTTTTATCAC AGCAACTAGT GGGGGTGGGG GTGGGGGTGG GGCGGGGATT CTGGGTATTT
  GGCTTTGGTT TGGTGGATTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320771971	CHEV_3_54375259	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215036876					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54478758 () rs orientation: forward

Symbol	Name	Function Class
Gm65161	predicted gene, 65161	within coordinates
Rr576809	regulatory region 576809	635 bp distal
Tssr29130	transcription start site region 29130	1420 bp downstream