rs215022720 SNP Detail

Summary

• ID
  rs215022720
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122207327 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACCCCAGCG CTCAGGAGGC
  TAAAGCAGGA AGATCATGTG TTCAGGTTAG CCTGGGCTAC TTAGCAAGAT TATATCTCAA
  AACAAGCAGC AATGAGAGAG AGGGAGAGGG GAGAGGGGGA GGGGAGAGAG GGAAAGGGGA
  GAGGGAAAGA GAAGGAGAGG GGAATGGAAA GAGAAAGGGA AGGGGTAGGG AGGGGGAGGG
  A
  GGGGGGAGGG GAGGGGGGAG GAGGGAGAGC AGGCTGCAGA CTTTGGTGAT GAGGACAAGT
  CCTGAAGCGA CCGGGTCAAA TACGGACAAG CAGGTTTAAA TGGACCTTTA ATAGAAAATA
  AGCCTGTGTT GCTAGGCACA TTTCTTTCAC CCTCTCACTA TTCAGCAAGT GCTGAGCAGG
  GCCCATTAAA CCATAGCCTT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/10SnJ	I/LnJ	LP/J	MA/MyJ	NON/ShiLtJ	PL/J	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SJL/J	SPRET/EiJ	SWR/J
ss359500268	MGP_WTSI_3_122116596	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/10SnJ	I/LnJ	LP/J	MA/MyJ	NON/ShiLtJ	PL/J	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SJL/J	SPRET/EiJ	SWR/J
rs215022720					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss359500268	MGP_WTSI_3_122116596	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122207327 () rs orientation: forward

Symbol	Name	Function Class
Rr584323	regulatory region 584323	1783 bp distal
Rr584324	regulatory region 584324	64 bp proximal