rs214920182 SNP Detail

Summary

• ID
  rs214920182
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:116022863 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCCCCATG AGGCCTTGAG
  TTGCTTTGAT AAAAAAGACA GCCTATGCAA ATGGACCGTT TTGAAGATGA ACTGAGAGAG
  ACTTGGCCAA TCTTCCGCTG GCACTCTTCT CAGTGTTGAG AGCACAGATG TGACAATGGT
  TAAATCTGCT TTTGCACTGA CTAGCTTCAT AACAATTCTG AACTTCCGTT TCTTCCCCCC
  A
  CCCCACCCCC CGCAACTTTC ACATATACAC CCTGACCAGT TTTCCCTCCC TCCCTTCAGG
  CCCCCCAACA ACTCCACAGC ATCTCCCCCT ACCCCAGATC CACTCCTTCC CCATTTCCCT
  TCAGAAAGGA TCAGACCTCT CAAATATATC ACCCCTGCAC GGCATAACAA ATTACAATAA
  GACCAGACAC AAACCCTCTT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	CAST/EiJ	CBA/J	CE/J	DBA/2J	FVB/NJ	I/LnJ	KK/HlJ	MA/MyJ	NON/ShiLtJ	NZB/BlNJ	PWK/PhJ	RF/J	RIIIS/J	ST/bJ
ss359347207	MGP_WTSI_3_115932132	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	CAST/EiJ	CBA/J	CE/J	DBA/2J	FVB/NJ	I/LnJ	KK/HlJ	MA/MyJ	NON/ShiLtJ	NZB/BlNJ	PWK/PhJ	RF/J	RIIIS/J	ST/bJ
rs214920182					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss359347207	MGP_WTSI_3_115932132	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116022863 () rs orientation: forward

Symbol	Name	Function Class
Rr583675	regulatory region 583675	543 bp distal
Rr583676	regulatory region 583676	within coordinates