rs214829849 SNP Detail

Summary

• ID
  rs214829849
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52813851 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGCGCTTT AACTTAGGAA
  TAATAGCTTA GTCAAAATGT GCCTTCATGA GTGAACTGGC TGTTCCTATC AGTTCACATG
  GAGCACTGAG CCTGGCCACC GGCTCTTGAG TTTGTGACCC GATGCCTCTA CTATCATATG
  CTTTTTGTAG TGCTTCATGT TCCAGACTAT AAAGACTGGA AAAGCACAGA ACCACGTTAC
  Y
  CTAACATTTT CTGTGGATTT CCTTCCTTCC TTCCTTCCTT CCTTCCTTCC TTCCTTCCTT
  CCTTCCTTCC TCCCTCCCTC CCTCCCTCCC TCCCTCCCTC CCCCCTCTCA CTCTCTCTCT
  CTTTGACTTT TAATTGTCAT AAATAAGTTT TGGCTACATC CTTTAATTTT TAAAGTATAC
  AATTTCATGT TTTACGATGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765867	CHEV_3_52710352	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214829849					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52813851 () rs orientation: forward

Symbol	Name	Function Class
Gm20750	predicted gene, 20750	326 bp downstream
Rr576600	regulatory region 576600	835 bp proximal
Rr576601	regulatory region 576601	924 bp proximal