rs214771876 SNP Detail

Summary

• ID
  rs214771876
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:93968068 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCCCTCTGT CTCTCCATCT TTCTCTCTCg
  tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtTTTGTGT GCTCAGGAGG
  GGCGTGTCAG GCACTGAAGA GATCTACACC ATGGGCAAGC ACCAGCCTTT CCATCCCCAC
  R
  GGCACCCTTC CCATTTACTA ACGGGGAGTT CCTGGTAGGA CAATGAATTG AGGAGTAGGG
  CCTGCCACAG GCACAGGTGC ATCAGTGTCC CCTTTCCTGG TGTACCACAA CACAGGGTAG
  GCATGTAGCA GATATTAGCT GTGGCCTCTT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319844435	CHEV_1_95936920	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214771876					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:93968068 () rs orientation: forward

Symbol	Name	Function Class
Pdcd1	programmed cell death 1	Intron