rs214683363 SNP Detail

Summary

• ID
  rs214683363
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:106545256 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGTATCA CCACACCAGG
  CAGCTGCTGC TGTTGTTTGT GTGTTTGTCT GTTGTTACAT GGGGTCTGGC AGCTTGAACT
  CAGGCCCTTG AGTTTGCAAA ACCAGTGTTT TACCAGTTGA TCTATCGGCT GTCTCGAAAA
  CCCTCTAAGC TCATTTTTTT TAAAAAGCTT TATATCTTGT TAATATATAT ATATATATAT
  R
  TGTTTCTAGC TTTTCTTGTG GCAAGAGGGA TCCATATTGG TAAGCCTTCA CTCTCTGCCC
  CTGCCTTTGA TGAGGTGTGG TTTTCCTGGC TCCCAGGAAA ACTCTACTTC CATGTCACGG
  AGGCCTTTGT AAGGTGACCA GCTAGTGCAG GCAAATGAAT TAATTTTCTT AGCGAACAGT
  TCTTTGGCAC TTCCTGTTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CE/J	CZECHII/EiJ	FVB/NJ	JF1/MsJ	LG/J	LP/J	MOLF/EiJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	SPRET/EiJ	ST/bJ	SWR/J
ss362742101	MGP_WTSI_4_106360664	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CE/J	CZECHII/EiJ	FVB/NJ	JF1/MsJ	LG/J	LP/J	MOLF/EiJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	SPRET/EiJ	ST/bJ	SWR/J
rs214683363					SNP	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss362742101	MGP_WTSI_4_106360664	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106545256 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mroh7	maestro heat-like repeat family member 7			Intron
				Noncoding-Transcript-Variant
Rr596793	regulatory region 596793			573 bp proximal