rs214641305 SNP Detail

Summary

• ID
  rs214641305
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137710754 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAATAATTG CTCCTGGCTA
  AGAAAGGAGA AGAGGGGCCG GGCATGGTGG CGCACGCCTT TAATCCCAAC ACTCGGGAGG
  CAGAGGTAGG TGGATTTCTG AGTTCGAGGC CAGCCTGGTC TACAAAGGGA GTTCCAGGAC
  AGCCAGGGCT ATACAGAGAA ACCCTGTCTC GAAAAACCAA AAAAAAAAAA ATAATAATAA
  W
  AAGGAGAAGA GGGTCTGAGC CAAATTTGTT CCATAAGACA ACACTTAAGT TATTAATTTG
  TTTTGGTTCT TAATTATTTT TCCTGAACGG TTCTTGCTAT GTAGTCCTGG CTGTCCTAGG
  ACTTGCTATG TGGTCCAAAC TGGTCCGAGA GTCTTAGCAA ACCTTCCTTA CCCTTCCAGT
  AATGGGGCTG CAGGTGTGAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321369441	CHEV_4_137539358	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214641305					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137710754 () rs orientation: forward

Symbol	Name	Function Class
Rr602808	regulatory region 602808	1202 bp distal
Rr602809	regulatory region 602809	811 bp proximal
Rr602810	regulatory region 602810	1782 bp proximal