rs214606866 SNP Detail

Summary

• ID
  rs214606866
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148244701 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTAGTCCG GCTGCCCCAC AACGCTGGGT ACTGGAACTG
  CGCCTTTCTG CCAGAGTTGG TTCACGATGC GGCCCCGCCC ACTGCCCTCA AGGCCCCGCC
  T
  ACCATTCCTT CAGGCCCCGC CTCACCCGCG CACTCCCCGG ATTCGCCCCC ATCACAGCGT
  AGGAAAATTA CCTGGGGGGT TGGGGAGGAG GAAAGCTCC                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321417739	CHEV_4_147534353	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214606866					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148244701 () rs orientation: forward

Symbol	Name	Function Class
Fbxo2	F-box protein 2	Intron
Fbxo44	F-box protein 44	Intron
Rr398857	regulatory region 398857	within coordinates
Rr604608	regulatory region 604608	within coordinates
Rr604609	regulatory region 604609	388 bp proximal
Tssr40263	transcription start site region 40263	48 bp downstream
Tssr40264	transcription start site region 40264	369 bp upstream
Tssr40265	transcription start site region 40265	387 bp upstream
Tssr40266	transcription start site region 40266	412 bp upstream
Tssr44596	transcription start site region 44596	642 bp upstream
Tssr44597	transcription start site region 44597	425 bp upstream
Tssr44598	transcription start site region 44598	407 bp upstream
Tssr44599	transcription start site region 44599	314 bp upstream
Tssr44600	transcription start site region 44600	172 bp upstream