rs214376405 SNP Detail

Summary

• ID
  rs214376405
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101855263 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAAACAAA ACAAAAAAGA
  AAGAAAGCCT AAATGGAAAG TCTAACTATT TATTCGTGGG AGAGAAATTT TGAAAAGATT
  AAATAAAAAA ACTTATATCC AGTTGGAACT GTAGAAGGCA TGAGACCCAC ATTCTCATGG
  ATAAGCATTA GATAAGCCAG AAATGTTAAA ATGCAGGTAG AAGGGTGTGC CACCACGCCC
  A
  GCACTTAGCT TGATTTTTAA ATCAGGCAGA GCCAGCAGCC TAGGTGGGGT GGGGTGGGGC
  TACCCACAGT GGACTGGACT ATCCCACATC CATCATCATA TTTGATGCCC TATAGACCAA
  TCTGATGGTG ACTGTTCTTC AATCCAGGTT TCTTCCCCTT GGATGACTCT AGCTTGTGTC
  AAGTGGCTAC AAACCAACCA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321231986	CHEV_4_101670671	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214376405					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101855263 () rs orientation: forward

Symbol	Name	Function Class
Rr376932	regulatory region 376932	within coordinates
Rr596214	regulatory region 596214	387 bp proximal
Rr596215	regulatory region 596215	657 bp proximal