rs214245021 SNP Detail

Summary

• ID
  rs214245021
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52814318 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATATACAT GAAAGATGTA
  TCATTATAGT AAAGAAAAAA TAACCGAAAA CATATTTTTC ATCTGTATAT GAATAGTCTT
  ATTCATAGAT AGACTTCATA ATATTGGATT TCTTCACATT ATCTGTTAAG AGAGGTCTAC
  ATGCTGTCTT ATGCTATAGT TACTGTGATG GAATAGCCAA CATCCACACT ATATTCTATT
  K
  TAATGTGAGA ACACCACCCC ATGTGAAGAC TGGCAGAAAC AGGCCAGCGT AGTTGATGTT
  TGTCAATGAT GCACACTGCC TGGATTGAAG TCTTCTCAGC CCCAGTGCTC TGAGCCAGCT
  CTGCCTGAGG ATCTTGGCAC ATTTGAATCC CAGTTGTCAC CACTTAGCTG TTATATTTAA
  AATTCCACTT CCAGGCTGGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765870	CHEV_3_52710819	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214245021					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52814318 () rs orientation: forward

Symbol	Name	Function Class
Gm20750	predicted gene, 20750	within coordinates
Rr576600	regulatory region 576600	368 bp proximal
Rr576601	regulatory region 576601	457 bp proximal