rs214106313 SNP Detail

Summary

• ID
  rs214106313
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135667824 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tttaGGGAG AAAAAAAAAA GTggcctgga
  gatagagctc acttggtacc atgcttgctt ggatacacag agcccttggt tcagttcctg
  gcactgcata aaccaagtgt ggtatgcatg cctgtgatcc aacaggatcc gaagctagtc
  Y
  ggcctgtcta tatagtgagc tcaaggctgc cctaagctgt atagactgtc CAGAGGAAGG
  GAAGGAGGAG AGAGCTAGCT TGTTTGGTCT CTTTAATGCA GAACACTGTG TGTGGTCCCT
  GGGGCTTCTC TCTCATTCTG GTGTCTGTCT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321353540	CHEV_4_135496428	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214106313					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135667824 () rs orientation: forward

Symbol	Name	Function Class
Fuca1	fucosidase, alpha-L- 1, tissue	213 bp downstream
Rr602205	regulatory region 602205	1377 bp distal
Rr602206	regulatory region 602206	1343 bp distal
Rr602207	regulatory region 602207	710 bp proximal
Rr602208	regulatory region 602208	1459 bp proximal