rs213962140 SNP Detail

Summary

• ID
  rs213962140
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:66989461 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTGAATTGA CTTCCCAAAG
  CTGTTGCTAC AGAAATGTAA TAAAAGCACA CTGTATTTAA GAATGAAGAT AACCCTGGCG
  GTGGTGGCGA ATGCCTTTAA TCCCAGCATT TGGGAGGCAG AGGCAGGCGG ATTTCTGAGT
  TCGAGGCTAG CCTGGTCTAC GGAGTGAGTT CCAGGACAGC CAGGGCTACA CAGAGAAACC
  Y
  TGTCTCGATG CCACCGTAGG GGAAAACTGG TTCTGGAAAA GGAGGTGCAG CCTCTGGGAG
  TGACAGTGCT GACAAGAAGT CTCAGGGTCC CAAAGGTGGT GGCAATGCAG TAAAGGTCAG
  ACACATTGTG TGTGAACAAC ATGGAAAAAT CATGGAAGCC ATGGAAAAGT TAAAGTCTGG
  GATGCGATTC AGTGAAGTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321811830	CHEV_6_66962471	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213962140					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:66989461 () rs orientation: forward

Symbol	Name	Function Class
Gm15644	predicted gene 15644	8 bp upstream
Gng12	guanine nucleotide binding protein (G protein), gamma 12	Intron
Rr631574	regulatory region 631574	562 bp proximal