rs213927800 SNP Detail

Summary

• ID
  rs213927800
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:128127173 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             ATCACAACCA ACGAAAACCC AATGTTGGCT GGCGAGAGCA GTGGAGATGA
  R
  ACTTCCATAC CCTACCACAG CCATTTTGAT GCGGATGGAC TCTTGGGATG           
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323532971	CHEV_10_127728360	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213927800					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128127173 () rs orientation: forward

Symbol	Name	Function Class
Stat2	signal transducer and activator of transcription 2	Coding-Synonymous
Tssr96388	transcription start site region 96388	1187 bp upstream