rs213754968 SNP Detail

Summary

• ID
  rs213754968
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127741225 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTGTAATG AGAGGCATTT TTGTTTGACT
  GTAGAGAGGt tttttaaaaa ttattttaat atatGAAATT GTAAGGAAAA AAATTAATAG
  AAAATATTTC CCATTAAGAG CTTGCAGCCA ACGTGTAGGG AACAAACAAG AACTCACCAT
  R
  GGCACAGACT TAAGTAGCTC TGAACAGAGA TGAAGTTCAA AGGCATCCCT TGACCAAGAG
  AGGCTACCAC TCTTGACTCT AAACGTGATC TCTGAGCTTG ACTTCCAGCT GCCAGACATC
  CAGAGTTGTT TTATCCTGCA TTGGGGTTCT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320958536	CHEV_3_127650494	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213754968					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127741225 () rs orientation: forward

Symbol	Name	Function Class
9830132P13Rik	RIKEN cDNA 9830132P13 gene	within coordinates
Rr398010	regulatory region 398010	1445 bp upstream
Rr584909	regulatory region 584909	858 bp proximal
Rr584910	regulatory region 584910	1297 bp proximal
Rr584911	regulatory region 584911	1524 bp proximal