rs213711564 SNP Detail

Summary

• ID
  rs213711564
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119460921 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTGGAGAG CAGTCTGAAT
  CAGGCCTGCT TCCTAGGAAT CTCACCCAGC TCCCAGGGTC CCGCTGTGGT CCGGTCTGTA
  AGTCACGCCG CGATACCAGT CTCCATCGGA TAAGCAAATA ATCCCACGAT CAGTACTCTG
  CAACAGTTTC TGTTTGTTTG AGTTTTAATT GTTAAGTGTA AGGTTAAGGG GCTGGAGAGA
  Y
  GGCTCGGTGG TGGGAGTGCA TGCTGCCCTT GCAGGAGGCT GACGTGGAGC TCCCAGCGCC
  CCCAGTCTCA GGTAACCCCA TCTCCAGGGG CCTCTGTGGG CACCTGCACT CAGGTGCACA
  GGCACACATG TAAGTCTCAC ATAATAAAAG TAAGTCTTTA AAGGGTCATA AATTAGTATT
  TGCAAGTTAA GATCATGGCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321928143	CHEV_6_119433978	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213711564					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119460921 () rs orientation: forward

Symbol	Name	Function Class
Fbxl14	F-box and leucine-rich repeat protein 14	1330 bp downstream
Rr637693	regulatory region 637693	1645 bp distal
Rr637694	regulatory region 637694	476 bp distal
Rr637695	regulatory region 637695	773 bp distal
Rr637696	regulatory region 637696	1598 bp proximal
Wnt5b	wingless-type MMTV integration site family, member 5B	Intron