rs213676255 SNP Detail

Summary

• ID
  rs213676255
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:69719900 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCACCGGA CTGCTCTTCC
  GAAGGTCCAG AGTTCAAATC CCAGCAACCA CATGGTGGCT CACAACCATC CGTAAGGAGA
  TCTGATTCCC TCTTCTGGAG TGTGTGAAGA CAGCTACAGT GTATTTACAT AAAATAATAA
  ATAAATCTTT AAAAATAAAG TTTTGATTCT ACCGGGTAAA TGGGTGTTGA GATGGCTGAC
  M
  GTGGGGTGGG TGGTCATTAT GTGGGCCTGG CGGCAGAGAT GGCTGACCGT GGGGTGGGTG
  GTCATTATGT GGGCCTGGCG GCAGAGATGG CTGACCGCGT GGGTGGTCAT TATGTGGGCC
  TGGCGGCAGA GATGGCTGAC CGTGGGGTGG GTGGTCATTA TGTGGGCCTG GCGGCAGAGA
  TGGCTGACAG TGGGGTGGGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S5/SvEvBrd	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	CE/J	CZECHII/EiJ	I/LnJ	JF1/MsJ	LEWES/EiJ	MA/MyJ	NON/ShiLtJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SJL/J	SPRET/EiJ	SWR/J	ZALENDE/EiJ
ss388953611	MGP_WTSI_13_69710659	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A	A
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S5/SvEvBrd	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	CE/J	CZECHII/EiJ	I/LnJ	JF1/MsJ	LEWES/EiJ	MA/MyJ	NON/ShiLtJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SJL/J	SPRET/EiJ	SWR/J	ZALENDE/EiJ
rs213676255					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss388953611	MGP_WTSI_13_69710659	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:69719900 () rs orientation: forward

Symbol	Name	Function Class
Srd5a1	steroid 5 alpha-reductase 1	1668 bp downstream