rs213657213 SNP Detail

Summary

• ID
  rs213657213
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:54458394 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATGGGGAG GGAAGGTAAG
  GAGGGAGTAG AGACAGAGAA CAGCAGACAG AGAGAGAAAG GGGAGGGGGA GAGGGAGAGG
  GAGAGAGGGA GAAGGAGAGG GAGGAGAGGG AGAGAGATGG GATGGGGAGA AAGGGCAGGG
  AGAGAAGGAA TAGAGAGTAA GAGAGCAAGG AGAGCCCAAA CAGCCCCTTT TATAGTAAGC
  Y
  AGGCATTACC TGGCTGTTGC AAGGTAACTG TGGGGCAGAG GCTAGAAGGA ATGCTAACAC
  ATATTGTATG GTTCCTGGGA AAAGAGGGGA GGAGAGAGGC AGTGACCATG AGGAGTACAA
  AATGAGACCT CGGGATACTA ATAAAGGCTC CATCTCTAAC ACCTGTGGAG GAGTGTGAGG
  GTGTTTGCTC ATGCTCATCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320771841	CHEV_3_54354895	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213657213					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54458394 () rs orientation: forward

Symbol	Name	Function Class
Rr576802	regulatory region 576802	932 bp proximal