rs213500763 SNP Detail

Summary

• ID
  rs213500763
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:54821319 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGACA TACAAACATC CAGTCAAATC
  T
  GGCAAGCCGA ACTGACCAAG GCAAA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320773069	CHEV_3_54717820	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213500763					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54821319 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13182	CpG island 13182	1504 bp proximal
Rr576863	regulatory region 576863	803 bp proximal
Rr576864	regulatory region 576864	1123 bp proximal
Rr576865	regulatory region 576865	1922 bp proximal
Rr576866	regulatory region 576866	1979 bp proximal
Rr576867	regulatory region 576867	1984 bp proximal
Sertm1	serine rich and transmembrane domain containing 1	Intron
Tssr33288	transcription start site region 33288	1916 bp downstream
Tssr33289	transcription start site region 33289	1969 bp downstream