rs213236948 SNP Detail

Summary

• ID
  rs213236948
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:100675252 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACCCCTCAG AGTCTACAGT CACATGGCTC
  CCTGGAGTGT TTTGCAGAGT GACATCTTAG CCCTTAGGAT ACTACTTCAA AAAAAAAAAA
  ATCATTGATC TAGAACTACA GAATCTATCT CCCTAGGAAT TCACAGTGCT ATTTAAAACT
  M
  TTAGTACTTT TTTTTTGGGG GGGGGGGGAG TACGTGTGTA ACTTTTTTTA CTTCATGGTT
  TTACAAGTGA TACATCTGGG ACCAACTGTG TTAATAATTT CCCTACAGTC TGAATGGTAA
  ATAGATGTCA CGATGGTCCT GCTGTGAACG                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320849505	CHEV_3_100571859	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213236948					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:100675252 () rs orientation: forward

Symbol	Name	Function Class
Rr581901	regulatory region 581901	154 bp proximal
Rr581902	regulatory region 581902	281 bp proximal