rs213174818 SNP Detail

Summary

• ID
  rs213174818
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:13151832 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGCAAAGG ACACTGTCTA
  TATCTATCAT AACTTGAGTT GGAGAATAGT GGCTAAAGGT TTGGCTCAAA GGTCAAGGCT
  TTTCCTTGCA GTCATGGTTT GATCTCTATA ACTGATTTAA AATAGTTATA ATTTCATTAT
  TCCTTAAACT CATAGTGTTT CAAATTGGAC TCTCCTGATG ATTAGATTGA CAGTTAGCCA
  R
  GGAAACTGCA CTAACTTTTG ACAGGAATAA AGGGACAAAA TCTAGGAACA TGCCTTTAAT
  AGCAGTATAC CTGAAGGTGA GGCAGGAGCC TCACCTGGAG TTCAAAGCCA GCTTGTGGAC
  TACATTGTAA AAACCCTGTC TCAAATAGAT AAGCTAAAGT GGATAGAAGG AGCACATAGG
  CAAGTACTCT GCCTTAAAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321747173	CHEV_6_13101833	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213174818					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13151832 () rs orientation: forward

Symbol	Name	Function Class
Rr626556	regulatory region 626556	367 bp proximal
Rr626557	regulatory region 626557	612 bp proximal