rs213168103 SNP Detail

Summary

• ID
  rs213168103
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:54538038 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATGCAAGC AGGACAGGTT
  TCTCTTCCTG CTAATTTGCA TCCTTCCACC GCACAGTTGT GAAAGCAGTG TCTGCTGCTA
  GGACAAGCTT GGCTTCCCTA CAGCTTTAAA TAAGTGTTAA GTATTTCGTC TTTGAAAACT
  AGATCAGAAA TTGTTGCTAT TGTTGTTGTT TGCTGTGCTA GGTGCCTCAC AAGAATTCCC
  M
  CACACACCCC TATCCCTGAT TCGTAGTCTA AGTGGTAAAA TATTGAAGGG AGATTGTAGG
  TCTCAAGGCC TACAATCCTA TTCTCTTTAG CTAGAATAGC TTTAATTTGA TTTGAGATTT
  TTATCCTTTC CAAACACCTT TTTTTTCCAC ATAAACTCTG GCTGGTTGTG TGACATGAGC
  TTCTAAACAC AGTTATCTGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320772259	CHEV_3_54434539	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213168103					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54538038 () rs orientation: forward

Symbol	Name	Function Class
Rr576819	regulatory region 576819	66 bp distal