rs213146712 SNP Detail

Summary

• ID
  rs213146712
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:102342943 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGCTTCAG TACTTCCGGT
  GCTGGAATTA CAGCTGTGAC CCTGCACTTA CTTTTTCACA GAGGTGCTTC AGCTCCAGAG
  TCTGATCTCT GTGTTTTCAC ATAAAGAATG TATATCCACA GGGCTATGTC TCCATTTCTC
  CAGTATAGTT AAGAATTGTC TTGGTCATAG TTGATGTGAA TCTCTTGCTG CGACTGATTT
  A
  CAAACTTTAT CACCAGTGTG TCTATATAGG AAGAAACAGC ATGCATGGAG CTGCTAGCAT
  CTGTTTTGTT TGTTTGTTTG TTTTCAGACA GCTGCTTAGG GTCTTAGGAT GTATCCCCTT
  CATCTCAATG AGTTCAGGGA AACCAGCATG TTTCCTTAAA CAAGATATTG ATGTTTGGTT
  TTCTCTGTCT TATTTACCTC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321233798	CHEV_4_102158351	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213146712					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:102342943 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Pde4b	phosphodiesterase 4B, cAMP specific			Intron
				Noncoding-Transcript-Variant
Rr596251	regulatory region 596251			675 bp distal
Rr596252	regulatory region 596252			728 bp distal
Rr596253	regulatory region 596253			543 bp distal
Rr596254	regulatory region 596254			426 bp proximal
Rr596255	regulatory region 596255			521 bp proximal