rs213084140 SNP Detail

Summary

• ID
  rs213084140
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:136514740 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGCGTGcag gtgtgtgcac aggtgtgtgc
  acaggtatgt gtgcagctgc atgcaagtgc acatgggtat cagaagacag tggatgtcag
  agtacagttt gggggagttg gttctttctt tttaccatgt tggtcttgga gatggaactc
  Y
  ggtcactagg tttggcagca agcaccttta ttgcctgagc catcttgcca gccccCTTAC
  TTGGTTTTTA ATGTAGGCTT TGAGGGGTTG TGTTGTGTCG AAAGCCATAG CAACTCCAAA
  CCACGGAAGA ATGTCTTGTT ATAGTTTTAG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319996214	CHEV_1_138483579	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213084140					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:136514740 () rs orientation: forward

Symbol	Name	Function Class
4933409D19Rik	RIKEN cDNA 4933409D19 gene	within coordinates
Gm57131	predicted gene, 57131	within coordinates
Rr419475	regulatory region 419475	803 bp proximal
Rr419476	regulatory region 419476	1684 bp proximal