rs213037827 SNP Detail

Summary

• ID
  rs213037827
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:10006002 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATATCTTGA TTTCTCTGCC
  TATGCTAATT GAAAGTTTTG CTGTTATAGT AGTCTGAGCT GGCATTTATG TTCTCTTAGG
  GTCTATCTGA CATCTGCCCA GGATCGTCTG GCTTTCATAA TCTCTAGTGA TAAGTCTCGT
  GTAATTCTGA TTGACGTGTC TTTATATGTT ATTTTTTTTC TAACTCCAGG GTTGTCTCCC
  K
  TTGTTATTTC TTTTTTGTTT GTATTTCCCA TTTTTAGATC TGGATGGTTT TGTTCAATTC
  CATCACTTGT TTGGTTGTAT TTTCCTGTAA TTCTTTAAGG GATTTTTGTG TTTCCTCTTT
  AAGGACTTAT GCCTGTTTAT CTGTGTTCTC TTGTATTTCT TTAAGAGAGT TATTTATATT
  CTTCTTAAAT CCCTCAATGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322101811	CHEV_7_10857424	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213037827					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:10006002 () rs orientation: forward

Symbol	Name	Function Class
Gm71895	predicted gene, 71895	within coordinates
Vmn1r66	vomeronasal 1 receptor 66	1753 bp downstream