rs213001445 SNP Detail

Summary

• ID
  rs213001445
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:38864254 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCTGGAAAA GGATTATGTG GTTATATATG
  TGTGTGTGGA TATAAGTGtg tggatatata tgtatgtgat agacttctgc ctgctgctcc
  tgttatcatg tcttcctcac caccatggac tgtcccccct tgaactgagt cagaataagc
  R
  TATATATGTG CACACATATA TATATATGAA CTTATAGTGA TGTTTGAATT GACAGAAGGA
  ATTGAAAATA GCCAAGTGAA GAACTCTAAG TAGAACCAAG CAGAAAGAAC AGAGGTGAGA
  ATGTTTGCTG ACTGTATGCA ACGTAACCTC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320723311	CHEV_3_38709027	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213001445					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38864254 () rs orientation: forward

Symbol	Name	Function Class
Gm54204	predicted gene, 54204	within coordinates
Rr575706	regulatory region 575706	1728 bp proximal