rs212876686 SNP Detail

Summary

• ID
  rs212876686
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:116015673 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAGGCAAT CACAGGCAAC
  CGTTCCCAAT TCCCTTATCT GAGGATGAAA TTTCCCTGAC TATGCAGAAA GGAGGCTGCC
  CTCGGCCTCC CAGAGGAGGC ATTTTTGAAA AGCAAGCATT TCCCTTTCTC AGAGCCACCC
  CCTTCAGAGA AGGTTAGCTT TCCGGGAGAG GCTCCAAACT GTCCAGCAAC TCTGCGTCCC
  Y
  GAATTTCGTA CAGAGCGACA GTAAGGAGAA AATTCAAAGA GAGTCCTTAA AAAGAAATAA
  ACAAAACAAC TTTTCAGCTG GCACGTAAAG GGGGGAAAGG GGACACAAGA AGACAGTCTG
  TTCCGAAGGC CTTGGAACCA AGTTAGTCGA CGACGCTGGA GCTAGAATCC TGAGTTAGTT
  CTCAGGTGGG TGTGCCAAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320894706	CHEV_3_115924942	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212876686					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116015673 () rs orientation: forward

Symbol	Name	Function Class
Rr583673	regulatory region 583673	within coordinates
Rr583674	regulatory region 583674	487 bp proximal